EnhancerDB
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  3. rs116213306[chr17:42625030]
Enhancers that have rs116213306[chr17:42625030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
chr17 42624802 42626014 vista696
VISTA
Transcript factors that have rs116213306[chr17:42625030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 21762459
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 107688170
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263064
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263065
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762555
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688200
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263217
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 21762562
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 107688202
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263226
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263227
chr17 42625019 42625031 ZBTB7B JASPAR yes 14109
chr17 42625019 42625031 ZBTB7C JASPAR yes 14110
chr17 42625019 42625031 ZBTB7B JASPAR yes 54406214
chr17 42625019 42625031 ZBTB7C JASPAR yes 54406215
chr17 42625020 42625032 ZBTB7A JASPAR yes 14111
chr17 42625020 42625032 ZBTB7A JASPAR yes 54406216
chr17 42625021 42625034 NFKB1 JASPAR yes 14112
chr17 42625021 42625034 NFKB1 JASPAR yes 54406217
chr17 42625027 42625041 TLX1 JASPAR yes 14113
chr17 42625027 42625041 TLX1 JASPAR yes 54406218
chr17 42625028 42625039 TFAP2A JASPAR yes 14114
chr17 42625028 42625039 TFAP2A JASPAR yes 54406219
chr17 42625028 42625040 TFAP2A JASPAR yes 14115
chr17 42625028 42625040 TFAP2B JASPAR yes 14116
chr17 42625028 42625040 TFAP2C JASPAR yes 14117
chr17 42625028 42625040 TFAP2A JASPAR yes 54406220
chr17 42625028 42625040 TFAP2B JASPAR yes 54406221
chr17 42625028 42625040 TFAP2C JASPAR yes 54406222
Genes associated with rs116213306[chr17:42625030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More