EnhancerDB
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  3. rs116217005[chr1:220467826]
Enhancers that have rs116217005[chr1:220467826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs116217005[chr1:220467826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220467812 220467827 HNF1A JASPAR yes 35481933
chr1 220467814 220467829 FOXA1 JASPAR yes 35481934
chr1 220467816 220467828 FOXC2 JASPAR yes 35481935
chr1 220467817 220467828 FOXC1 JASPAR yes 35481937
chr1 220467818 220467829 FOXA1 JASPAR yes 35481938
chr1 220467818 220467829 FOXH1 JASPAR yes 35481939
chr1 220467825 220467843 MAFF JASPAR yes 35481940
chr1 220467826 220467830 NFE TRANSFAC yes 35481941
chr1 220467826 220467831 GATA1 TRANSFAC yes 35481942
chr1 220467826 220467832 GATA3 JASPAR yes 35481943
chr1 220467826 220467841 MAFK JASPAR yes 35481944
Genes associated with rs116217005[chr1:220467826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More