EnhancerDB
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  3. rs116221659[chr1:40297069]
Enhancers that have rs116221659[chr1:40297069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116221659[chr1:40297069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40297065 40297077 TFAP2A JASPAR yes 28294764
chr1 40297066 40297075 TFAP2A JASPAR yes 28294765
Genes associated with rs116221659[chr1:40297069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More