EnhancerDB
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  3. rs116270052[chr1:31505420]
Enhancers that have rs116270052[chr1:31505420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31495565 31517775 enh193
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
Transcript factors that have rs116270052[chr1:31505420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31505413 31505428 MEF2C JASPAR yes 27900892
chr1 31505415 31505430 FOXP1 JASPAR yes 27900893
chr1 31505416 31505431 FOXP1 JASPAR yes 27900894
chr1 31505417 31505423 TBP TRANSFAC yes 27900895
chr1 31505417 31505432 FOXP1 JASPAR yes 27900896
chr1 31505418 31505433 FOXP1 JASPAR yes 27900897
chr1 31505418 31505439 IRF1 JASPAR yes 27900898
chr1 31505419 31505434 FOXP1 JASPAR yes 27900899
chr1 31505420 31505435 FOXP1 JASPAR yes 27900900
Genes associated with rs116270052[chr1:31505420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More