EnhancerDB
  1. Home
  2. SNP
  3. rs116314370[chr1:25355399]
Enhancers that have rs116314370[chr1:25355399]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
Transcript factors that have rs116314370[chr1:25355399]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802491
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802492
chr1 25355056 25358083 ZNF274 GTRD no Bone Marrow (K562) 107802493
chr1 25355385 25355400 TFAP2A JASPAR yes 27555545
chr1 25355385 25355400 TFAP2C JASPAR yes 27555546
chr1 25355388 25355400 TFAP2A JASPAR yes 27555547
chr1 25355388 25355400 TFAP2B JASPAR yes 27555548
chr1 25355388 25355400 TFAP2C JASPAR yes 27555549
chr1 25355390 25355399 TFAP2A JASPAR yes 27555551
chr1 25355399 25355420 REST JASPAR yes 27555552
Genes associated with rs116314370[chr1:25355399], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More