EnhancerDB
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  3. rs116322601[chr17:55677926]
Enhancers that have rs116322601[chr17:55677926]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116322601[chr17:55677926]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55677920 55677930 GABPA JASPAR yes 54973740
chr17 55677920 55677933 ELF1 JASPAR yes 54973741
chr17 55677925 55677934 HIC2 JASPAR yes 54973742
Genes associated with rs116322601[chr17:55677926], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More