EnhancerDB
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  3. rs116329059[chr1:202045749]
Enhancers that have rs116329059[chr1:202045749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116329059[chr1:202045749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 21366482
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 107857653
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202045101 202045852 TCF7L2 UCSC Txn Factor no Conserved 107857660
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 21366526
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 107857704
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 21366527
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 107857705
chr1 202045348 202045852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366532
chr1 202045348 202045852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857712
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 21366533
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 107857713
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202045446 202048007 ZBTB33 GTRD no Lung (A549) 107857715
chr1 202045472 202047211 ZNF143 GTRD no Epithelial (MCF-7) 21366535
chr1 202045472 202047211 ZNF143 GTRD no Epithelial (MCF-7) 107857716
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 21366536
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 107857717
chr1 202045496 202047588 ZNF143 GTRD no Epithelial (MCF-7) 21366537
chr1 202045496 202047588 ZNF143 GTRD no Epithelial (MCF-7) 107857718
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 21366538
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 107857719
chr1 202045541 202047565 ZNF143 GTRD no Epithelial (MCF-7) 21366539
chr1 202045553 202048520 ZNF143 GTRD no Epithelial (MCF-7) 21366540
chr1 202045574 202047612 ZNF143 GTRD no Epithelial (MCF-7) 21366541
chr1 202045578 202047953 ZNF143 GTRD no Epithelial (MCF-7) 21366542
chr1 202045587 202046095 ZNF274 GTRD no Bone Marrow (K562) 21366543
chr1 202045601 202047864 ZNF143 GTRD no Epithelial (MCF-7) 21366544
chr1 202045609 202047827 ZNF143 GTRD no Epithelial (MCF-7) 21366545
chr1 202045618 202047834 TCF7L2 GTRD no Colon (HCT116) 21366546
chr1 202045621 202048485 ZNF143 GTRD no Epithelial (MCF-7) 21366547
chr1 202045637 202047802 ZNF143 GTRD no Epithelial (MCF-7) 21366548
chr1 202045647 202047861 ZNF143 GTRD no Epithelial (MCF-7) 21366549
chr1 202045669 202047872 ZNF143 GTRD no Epithelial (MCF-7) 21366550
chr1 202045682 202045943 ZNF274 GTRD no Bone Marrow (K562) 21366551
chr1 202045696 202047969 ZNF143 GTRD no Epithelial (MCF-7) 21366552
chr1 202045718 202047880 ZNF143 GTRD no Epithelial (MCF-7) 21366553
chr1 202045734 202045750 POU4F2 JASPAR yes 34550222
chr1 202045734 202045750 POU4F3 JASPAR yes 34550223
chr1 202045736 202047858 ZNF143 GTRD no Epithelial (MCF-7) 21366554
chr1 202045740 202045750 HOXA13 JASPAR yes 34550225
chr1 202045740 202045750 HOXB13 JASPAR yes 34550226
chr1 202045740 202045750 HOXC10 JASPAR yes 34550227
chr1 202045740 202045750 HOXD11 JASPAR yes 34550228
chr1 202045740 202045750 HOXD13 JASPAR yes 34550229
chr1 202045740 202045751 HOXA10 JASPAR yes 34550230
chr1 202045740 202045751 HOXC11 JASPAR yes 34550231
chr1 202045740 202045751 HOXC12 JASPAR yes 34550232
chr1 202045740 202045751 HOXC13 JASPAR yes 34550233
chr1 202045740 202045751 HOXD12 JASPAR yes 34550234
chr1 202045741 202045750 CDX1 JASPAR yes 34550235
chr1 202045741 202045752 CDX2 JASPAR yes 34550236
chr1 202045749 202045758 HIC2 JASPAR yes 34550237
Genes associated with rs116329059[chr1:202045749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More