EnhancerDB
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  3. rs116340884[chr17:54866294]
Enhancers that have rs116340884[chr17:54866294]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs116340884[chr17:54866294]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54866285 54866299 TLX1 JASPAR yes 54913392
Genes associated with rs116340884[chr17:54866294], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More