EnhancerDB
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  3. rs116359487[chr1:25022071]
Enhancers that have rs116359487[chr1:25022071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 25021969 25022194 vista791
VISTA
Transcript factors that have rs116359487[chr1:25022071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25022066 25022072 SP1 TRANSFAC yes 27519384
chr1 25022066 25022072 SP1 TRANSFAC yes 118251623
chr1 25022067 25022072 SP1 TRANSFAC yes 27519385
chr1 25022067 25022072 SP1 TRANSFAC yes 118251624
chr1 25022070 25022090 ESR1 JASPAR yes 27519386
chr1 25022070 25022090 ESR1 JASPAR yes 118251625
Genes associated with rs116359487[chr1:25022071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More