EnhancerDB
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  3. rs116388603[chr1:222009084]
Enhancers that have rs116388603[chr1:222009084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116388603[chr1:222009084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222008850 222009759 ZNF143 GTRD no Epithelial (MCF-7) 21382823
chr1 222008913 222009732 ZNF274 GTRD no Blood (GM12878) 21382824
chr1 222008913 222009763 ZNF274 GTRD no Blood (GM12878) 21382825
chr1 222008919 222013530 AR GTRD no Prostate (PC-3) 21382826
chr1 222008919 222013530 AR GTRD no Prostate (PC-3) 107872234
chr1 222008962 222009427 ZNF274 GTRD no Blood (GM12878) 21382827
chr1 222008980 222009726 ZNF143 GTRD no Epithelial (MCF-7) 21382828
chr1 222008992 222009568 ZNF274 GTRD no Cervix (HeLa-S3) 21382829
chr1 222009031 222009921 ZNF274 GTRD no Blood (GM12878) 21382830
chr1 222009033 222009659 ZNF274 GTRD no Blood (GM12878) 21382831
chr1 222009040 222009612 ZNF143 GTRD no Epithelial (MCF-7) 21382832
chr1 222009047 222009421 ZNF143 GTRD no Epithelial (MCF-7) 21382833
chr1 222009053 222009457 ZNF274 GTRD no Blood (GM12878) 21382834
chr1 222009054 222009642 ZNF143 GTRD no Epithelial (MCF-7) 21382835
chr1 222009059 222009598 ZNF274 GTRD no Blood (GM12878) 21382836
chr1 222009060 222009675 ZNF143 GTRD no Epithelial (MCF-7) 21382837
chr1 222009064 222009471 ZNF274 GTRD no Blood (GM12878) 21382838
chr1 222009073 222009535 ZNF274 GTRD no Cervix (HeLa-S3) 21382839
chr1 222009073 222009547 ZNF274 GTRD no Cervix (HeLa-S3) 21382840
chr1 222009074 222009086 TEAD1 JASPAR yes 35573396
Genes associated with rs116388603[chr1:222009084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More