EnhancerDB
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  3. rs116389796[chr17:55685602]
Enhancers that have rs116389796[chr17:55685602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116389796[chr17:55685602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55685592 55685611 CTCF JASPAR yes 54974847
chr17 55685594 55685603 THAP1 JASPAR yes 54974848
chr17 55685598 55685607 ZEB1 JASPAR yes 54974849
chr17 55685601 55685606 USF2 TRANSFAC yes 54974850
Genes associated with rs116389796[chr17:55685602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More