EnhancerDB
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  3. rs116395543[chr1:212653313]
Enhancers that have rs116395543[chr1:212653313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs116395543[chr1:212653313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212653300 212653316 SOX8 JASPAR yes 35127925
chr1 212653302 212653313 TBX20 JASPAR yes 35127926
chr1 212653307 212653323 POU4F2 JASPAR yes 35127927
chr1 212653309 212653313 YY1 TRANSFAC yes 35127928
chr1 212653309 212653324 FOXP1 JASPAR yes 35127929
Genes associated with rs116395543[chr1:212653313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More