EnhancerDB
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  3. rs116397305[chr1:31981773]
Enhancers that have rs116397305[chr1:31981773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs116397305[chr1:31981773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31981768 31981783 JUND JASPAR yes 27936341
chr1 31981769 31981782 JUN JASPAR yes 27936342
chr1 31981770 31981783 ATF4 JASPAR yes 27936343
chr1 31981771 31981782 CEBPA JASPAR yes 27936344
chr1 31981771 31981783 HLF JASPAR yes 27936345
chr1 31981772 31981783 CEBPB JASPAR yes 27936346
Genes associated with rs116397305[chr1:31981773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 32665987 32670988 + CCDC28B ENSG00000160050.10 32665987 684214 Esophagus 0.00722398 447