EnhancerDB
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  3. rs116409299[chr1:3230915]
Enhancers that have rs116409299[chr1:3230915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116409299[chr1:3230915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3230395 3231174 TCF7L2 GTRD no Colon (HCT116) 107801846
chr1 3230572 3231882 TCF7L2 GTRD no Colon (HCT116) 107801847
chr1 3230899 3230920 ZNF263 JASPAR yes 26278538
chr1 3230902 3230923 ZNF263 JASPAR yes 26278539
chr1 3230904 3230925 ZNF263 JASPAR yes 26278540
chr1 3230906 3230917 E2F6 JASPAR yes 26278541
Genes associated with rs116409299[chr1:3230915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More