EnhancerDB
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  3. rs116420445[chr1:25801969]
Enhancers that have rs116420445[chr1:25801969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25791765 25810575 enh156
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs116420445[chr1:25801969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25801872 25802562 ZNF274 GTRD no Blood (GM12878) 107802503
chr1 25801962 25801976 PLAG1 JASPAR yes 27578675
chr1 25801968 25801986 RARA JASPAR yes 27578676
chr1 25801969 25801977 TBX15 JASPAR yes 27578677
chr1 25801969 25801980 E2F6 JASPAR yes 27578678
Genes associated with rs116420445[chr1:25801969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More