EnhancerDB
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  3. rs116423388[chr6:41698453]
Enhancers that have rs116423388[chr6:41698453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41698347 41698506 vista51933
VISTA
Transcript factors that have rs116423388[chr6:41698453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41698218 41698662 GATA2 UCSC Txn Factor no Conserved 108540189
chr6 41698360 41698506 EP300 UCSC Txn Factor no Conserved 108540190
chr6 41698448 41698463 JUND JASPAR yes 70363394
chr6 41698448 41698463 JUND JASPAR yes 101670332
chr6 41698449 41698453 H1TF2 TRANSFAC yes 70363395
chr6 41698449 41698453 NFE TRANSFAC yes 70363396
chr6 41698449 41698453 SRF TRANSFAC yes 70363397
chr6 41698449 41698453 H1TF2 TRANSFAC yes 101670333
chr6 41698449 41698453 NFE TRANSFAC yes 101670334
chr6 41698449 41698453 SRF TRANSFAC yes 101670335
chr6 41698450 41698464 ATF7 JASPAR yes 70363398
chr6 41698450 41698464 BATF3 JASPAR yes 70363399
chr6 41698450 41698464 ATF7 JASPAR yes 101670336
chr6 41698450 41698464 BATF3 JASPAR yes 101670337
chr6 41698451 41698463 JDP2 JASPAR yes 70363400
chr6 41698451 41698463 JDP2 JASPAR yes 101670338
chr6 41698451 41698466 JUND JASPAR yes 70363401
chr6 41698451 41698466 JUND JASPAR yes 101670339
chr6 41698452 41698465 JUN JASPAR yes 70363402
chr6 41698452 41698465 JUN JASPAR yes 101670340
chr6 41698453 41698460 JUN TRANSFAC yes 70363403
chr6 41698453 41698460 JUN TRANSFAC yes 101670341
Genes associated with rs116423388[chr6:41698453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More