EnhancerDB
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  3. rs116424103[chr16:1209489]
Enhancers that have rs116424103[chr16:1209489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1204345 1228235 enh31663
Brain (SK-N-MC) Ovary Astrocyte Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Pancreas Uterus Heart
Transcript factors that have rs116424103[chr16:1209489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1207855 1210033 TCF7L2 GTRD no Colon (HCT116) 21684318
chr16 1207855 1210033 TCF7L2 GTRD no Colon (HCT116) 108171256
chr16 1208410 1209605 ZNF143 GTRD no Epithelial (MCF-7) 108171257
chr16 1208657 1209795 TCF7L2 GTRD no Colon (HCT116) 21684319
chr16 1208657 1209795 TCF7L2 GTRD no Colon (HCT116) 108171258
chr16 1208903 1209527 TCF7L2 GTRD no Colon (HCT116) 21684320
chr16 1208903 1209527 TCF7L2 GTRD no Colon (HCT116) 108171259
chr16 1208933 1209742 TCF7L2 GTRD no Colon (HCT116) 21684321
chr16 1208933 1209742 TCF7L2 GTRD no Colon (HCT116) 108171260
chr16 1208972 1210011 ZNF143 GTRD no Epithelial (MCF-7) 108171261
chr16 1209002 1209512 ZNF274 GTRD no Bone Marrow (K562) 108171262
chr16 1209069 1209719 TCF7L2 GTRD no Colon (HCT116) 21684322
chr16 1209069 1209719 TCF7L2 GTRD no Colon (HCT116) 108171263
chr16 1209480 1209500 TBX19 JASPAR yes 9139634
chr16 1209480 1209500 TBX19 JASPAR yes 49326071
chr16 1209482 1209498 T JASPAR yes 9139635
chr16 1209482 1209498 T JASPAR yes 49326072
Genes associated with rs116424103[chr16:1209489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More