EnhancerDB
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  3. rs11642485[chr16:85165684]
Enhancers that have rs11642485[chr16:85165684]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11642485[chr16:85165684]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85165680 85165688 MEIS2 JASPAR yes 12022835
chr16 85165680 85165688 MEIS3 JASPAR yes 12022836
chr16 85165681 85165685 NFE TRANSFAC yes 12022837
chr16 85165681 85165692 CDX2 JASPAR yes 12022838
chr16 85165682 85165693 HOXA10 JASPAR yes 12022839
chr16 85165682 85165693 HOXC11 JASPAR yes 12022840
chr16 85165682 85165693 HOXC12 JASPAR yes 12022841
chr16 85165682 85165693 HOXC13 JASPAR yes 12022842
chr16 85165682 85165693 HOXD12 JASPAR yes 12022843
chr16 85165683 85165692 CDX1 JASPAR yes 12022844
chr16 85165683 85165693 HOXA13 JASPAR yes 12022845
chr16 85165683 85165693 HOXC10 JASPAR yes 12022846
chr16 85165683 85165693 HOXD11 JASPAR yes 12022847
chr16 85165683 85165693 HOXD13 JASPAR yes 12022848
chr16 85165683 85165698 FOXP1 JASPAR yes 12022849
Genes associated with rs11642485[chr16:85165684], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More