EnhancerDB
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  3. rs11642575[chr16:85166049]
Enhancers that have rs11642575[chr16:85166049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11642575[chr16:85166049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85165833 85168881 ZNF274 GTRD no Liver (HepG2) 21720048
chr16 85165839 85166409 ZNF274 GTRD no Liver (HepG2) 21720049
chr16 85165842 85166391 ZNF274 GTRD no Liver (HepG2) 21720050
chr16 85165857 85166363 ZNF274 GTRD no Liver (HepG2) 21720051
chr16 85166000 85168296 ZNF274 GTRD no Liver (HepG2) 21720052
chr16 85166036 85166051 TFAP2A JASPAR yes 12022889
chr16 85166038 85166053 TFAP2C JASPAR yes 12022890
chr16 85166039 85166050 TFAP2A JASPAR yes 12022891
chr16 85166039 85166050 TFAP2B JASPAR yes 12022892
chr16 85166039 85166050 TFAP2C JASPAR yes 12022893
chr16 85166040 85166049 TFAP2A JASPAR yes 12022894
chr16 85166043 85166062 PAX5 JASPAR yes 12022895
Genes associated with rs11642575[chr16:85166049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More