EnhancerDB
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  3. rs116428261[chr17:46566985]
Enhancers that have rs116428261[chr17:46566985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs116428261[chr17:46566985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46566970 46566985 FOXP1 JASPAR yes 54589175
chr17 46566979 46566985 SOX10 JASPAR yes 54589186
chr17 46566981 46566994 NR2F1 JASPAR yes 54589187
chr17 46566985 46566989 ESR1 TRANSFAC yes 54589188
Genes associated with rs116428261[chr17:46566985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More