EnhancerDB
  1. Home
  2. SNP
  3. rs116443588[chr1:220467355]
Enhancers that have rs116443588[chr1:220467355]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs116443588[chr1:220467355]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220467340 220467355 ZIC3 JASPAR yes 35481861
chr1 220467340 220467355 ZIC4 JASPAR yes 35481862
chr1 220467341 220467355 GLIS2 JASPAR yes 35481863
chr1 220467341 220467355 ZIC1 JASPAR yes 35481864
chr1 220467349 220467356 SP1 TRANSFAC yes 35481866
Genes associated with rs116443588[chr1:220467355], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More