EnhancerDB
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  3. rs116462541[chr16:1341127]
Enhancers that have rs116462541[chr16:1341127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr16 1341001 1341384 vista21545
VISTA
Transcript factors that have rs116462541[chr16:1341127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1340720 1341910 TCF7L2 GTRD no Colon (HCT116) 21684582
chr16 1340720 1341910 TCF7L2 GTRD no Colon (HCT116) 108171334
chr16 1340787 1341443 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21684583
chr16 1340787 1341443 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108171335
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 21684584
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171336
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171337
chr16 1340827 1341227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108171338
chr16 1340906 1341282 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684585
chr16 1340906 1341282 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171339
chr16 1340921 1341211 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684586
chr16 1340921 1341211 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108171340
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 21684587
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 108171341
chr16 1341015 1341704 TCF7L2 GTRD no Colon (HCT116) 21684589
chr16 1341015 1341704 TCF7L2 GTRD no Colon (HCT116) 108171343
chr16 1341017 1341153 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108171345
chr16 1341112 1341131 CTCF JASPAR yes 9148684
chr16 1341112 1341131 CTCF JASPAR yes 49326537
chr16 1341122 1342220 ZNF274 GTRD no Bone Marrow (K562) 108171346
Genes associated with rs116462541[chr16:1341127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More