EnhancerDB
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  3. rs116473860[chr6:110871022]
Enhancers that have rs116473860[chr6:110871022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 110836885 110871534 enh23506
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116473860[chr6:110871022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 110871017 110871027 GSC2 JASPAR yes 104297300
chr6 110871018 110871026 OTX1 JASPAR yes 104297301
chr6 110871018 110871026 OTX2 JASPAR yes 104297302
chr6 110871021 110871033 HNF1B JASPAR yes 104297303
Genes associated with rs116473860[chr6:110871022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More