EnhancerDB
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  3. rs116504350[chr17:80249423]
Enhancers that have rs116504350[chr17:80249423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116504350[chr17:80249423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80247341 80249571 TCF7L2 GTRD no Colon (HCT116) 21798690
chr17 80247367 80249648 TCF7L2 GTRD no Colon (HCT116) 21798691
chr17 80247516 80249647 ZNF143 GTRD no Epithelial (MCF-7) 21798693
chr17 80247525 80249658 TCF7L2 GTRD no Colon (HCT116) 21798694
chr17 80248571 80249603 ZNF143 GTRD no Epithelial (MCF-7) 21798738
chr17 80248626 80249603 ZNF143 GTRD no Epithelial (MCF-7) 21798739
chr17 80248651 80249496 TCF7L2 GTRD no Colon (HCT116) 21798741
chr17 80248769 80249628 ZNF274 GTRD no Bone Marrow (K562) 21798743
chr17 80248811 80249424 ZNF274 GTRD no Bone Marrow (K562) 21798748
chr17 80248843 80249473 ZNF274 GTRD no Bone Marrow (K562) 21798752
chr17 80248953 80249597 ZNF143 GTRD no Epithelial (MCF-7) 21798760
chr17 80248967 80249539 ZNF274 GTRD no Bone Marrow (K562) 21798763
chr17 80249330 80249906 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798765
chr17 80249422 80249434 YY1 JASPAR yes 56358635
Genes associated with rs116504350[chr17:80249423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More