EnhancerDB
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  3. rs116516860[chr2:235756973]
Enhancers that have rs116516860[chr2:235756973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235728845 235759495 enh19348
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Lung
Transcript factors that have rs116516860[chr2:235756973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235756967 235756977 RORA JASPAR yes 81912376
chr2 235756968 235756979 ESRRA JASPAR yes 81912377
chr2 235756968 235756979 ESRRB JASPAR yes 81912378
chr2 235756968 235756981 NR2F1 JASPAR yes 81912379
chr2 235756970 235756978 NR4A2 JASPAR yes 81912380
chr2 235756972 235756976 ESR1 TRANSFAC yes 81912381
Genes associated with rs116516860[chr2:235756973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More