EnhancerDB
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  3. rs11652502[chr17:1625215]
Enhancers that have rs11652502[chr17:1625215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1621105 1630375 enh4200
Liver (HepG2) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Stomach
Transcript factors that have rs11652502[chr17:1625215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 21739341
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 108229101
chr17 1624944 1630554 ZNF274 GTRD no Blood (GM12878) 108229102
chr17 1624970 1626564 ZNF274 GTRD no Blood (GM12878) 21739342
chr17 1624970 1626564 ZNF274 GTRD no Blood (GM12878) 108229103
chr17 1624970 1626564 ZNF274 GTRD no Blood (GM12878) 108229104
chr17 1625127 1626108 ZNF274 GTRD no Bone Marrow (K562) 108229105
chr17 1625215 1625233 NR3C1 JASPAR yes 52697689
Genes associated with rs11652502[chr17:1625215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 1611064 1613732 - TLCD2 ENSG00000185561.8 1613732 11483 Liver 0.141698 15224