EnhancerDB
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  3. rs116540486[chr17:5731237]
Enhancers that have rs116540486[chr17:5731237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 5722485 5740477 enh32064
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs116540486[chr17:5731237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 5731234 5731244 GABPA JASPAR yes 52886397
chr17 5731236 5731242 ETS1 JASPAR yes 52886398
chr17 5731236 5731242 SPI1 JASPAR yes 52886399
Genes associated with rs116540486[chr17:5731237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More