EnhancerDB
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  3. rs11654064[chr17:70360728]
Enhancers that have rs11654064[chr17:70360728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11654064[chr17:70360728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70360702 70361397 ZNF143 GTRD no Epithelial (MCF-7) 21784289
chr17 70360712 70360728 RFX2 JASPAR yes 55778067
chr17 70360712 70360728 RFX3 JASPAR yes 55778068
chr17 70360712 70360728 RFX4 JASPAR yes 55778069
chr17 70360712 70360728 RFX5 JASPAR yes 55778070
chr17 70360715 70360730 RFX5 JASPAR yes 55778071
chr17 70360723 70360739 SOX4 JASPAR yes 55778073
chr17 70360723 70360739 SOX8 JASPAR yes 55778074
Genes associated with rs11654064[chr17:70360728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More