EnhancerDB
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  3. rs116556480[chr17:80265989]
Enhancers that have rs116556480[chr17:80265989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116556480[chr17:80265989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80260780 80266364 ZNF274 GTRD no Blood (GM12878) 21799702
chr17 80260795 80266377 ZNF274 GTRD no Blood (GM12878) 21799722
chr17 80260796 80266374 ZNF274 GTRD no Blood (GM12878) 21799725
chr17 80260853 80266375 ZNF274 GTRD no Blood (GM12878) 21799772
chr17 80262410 80266053 ZNF274 GTRD no Blood (GM12878) 21799877
chr17 80263027 80266271 ZNF274 GTRD no Blood (GM12878) 21799905
chr17 80265171 80266042 ZNF274 GTRD no Blood (GM12878) 21800047
chr17 80265227 80266282 ZNF274 GTRD no Blood (GM12878) 21800048
chr17 80265230 80266029 ZNF274 GTRD no Blood (GM12878) 21800049
chr17 80265241 80266145 ZNF274 GTRD no Blood (GM12878) 21800050
chr17 80265253 80266081 ZNF274 GTRD no Blood (GM12878) 21800051
chr17 80265260 80266298 ZNF274 GTRD no Blood (GM12878) 21800052
chr17 80265266 80266094 ZNF274 GTRD no Blood (GM12878) 21800053
chr17 80265269 80266469 ZNF274 GTRD no Blood (GM12878) 21800054
chr17 80265277 80266082 ZNF274 GTRD no Blood (GM12878) 21800055
chr17 80265307 80266199 ZNF274 GTRD no Blood (GM12878) 21800056
chr17 80265319 80266060 ZNF274 GTRD no Blood (GM12878) 21800057
chr17 80265321 80266118 ZNF274 GTRD no Blood (GM12878) 21800058
chr17 80265325 80266154 ZNF274 GTRD no Blood (GM12878) 21800060
chr17 80265330 80266036 ZNF274 GTRD no Blood (GM12878) 21800061
chr17 80265335 80266033 ZNF274 GTRD no Blood (GM12878) 21800062
chr17 80265338 80266195 ZNF274 GTRD no Blood (GM12878) 21800063
chr17 80265342 80266066 ZNF274 GTRD no Blood (GM12878) 21800064
chr17 80265343 80266187 ZNF274 GTRD no Blood (GM12878) 21800065
chr17 80265370 80266160 ZNF274 GTRD no Blood (GM12878) 21800066
chr17 80265373 80266013 ZNF274 GTRD no Blood (GM12878) 21800067
chr17 80265385 80266043 ZNF274 GTRD no Blood (GM12878) 21800068
chr17 80265385 80266083 ZNF274 GTRD no Blood (GM12878) 21800069
chr17 80265391 80266060 ZNF274 GTRD no Blood (GM12878) 21800071
chr17 80265416 80266146 ZNF274 GTRD no Blood (GM12878) 21800072
chr17 80265453 80266177 ZNF274 GTRD no Blood (GM12878) 21800076
chr17 80265481 80266361 ZNF274 GTRD no Blood (GM12878) 21800077
chr17 80265495 80266017 ZNF274 GTRD no Blood (GM12878) 21800079
chr17 80265540 80266049 ZNF274 GTRD no Blood (GM12878) 21800081
chr17 80265609 80266055 ZNF274 GTRD no Blood (GM12878) 21800082
chr17 80265663 80266086 ZNF274 GTRD no Blood (GM12878) 21800083
chr17 80265940 80266267 ZNF143 GTRD no Epithelial (MCF-7) 21800084
chr17 80265978 80265999 IRF1 JASPAR yes 56361338
chr17 80265980 80265995 PRDM1 JASPAR yes 56361339
chr17 80265980 80265995 STAT2 JASPAR yes 56361340
chr17 80265984 80265998 IRF7 JASPAR yes 56361341
chr17 80265985 80266003 SRF JASPAR yes 56361342
Genes associated with rs116556480[chr17:80265989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More