EnhancerDB
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  3. rs11658394[chr17:70472840]
Enhancers that have rs11658394[chr17:70472840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70468945 70477575 enh52576
Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs11658394[chr17:70472840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70472401 70473504 ZNF143 GTRD no Epithelial (MCF-7) 21785391
chr17 70472539 70473498 ZNF143 GTRD no Epithelial (MCF-7) 21785392
chr17 70472695 70473484 ZNF143 GTRD no Epithelial (MCF-7) 21785393
chr17 70472700 70473191 TCF7L2 GTRD no Colon (HCT116) 21785394
chr17 70472729 70473060 TCF7L2 GTRD no Colon (HCT116) 21785395
chr17 70472819 70472840 ZNF263 JASPAR yes 55793143
chr17 70472824 70472844 RREB1 JASPAR yes 55793144
chr17 70472826 70472847 ZNF263 JASPAR yes 55793145
chr17 70472828 70472848 RREB1 JASPAR yes 55793146
chr17 70472830 70472840 ZNF740 JASPAR yes 55793148
chr17 70472833 70472840 SP1 TRANSFAC yes 55793149
chr17 70472833 70472843 SP1 JASPAR yes 55793150
chr17 70472834 70472842 SP1 TRANSFAC yes 55793151
chr17 70472835 70472840 SP1 TRANSFAC yes 55793152
chr17 70472836 70472841 SP1 TRANSFAC yes 55793153
chr17 70472836 70472842 SP1 TRANSFAC yes 55793154
chr17 70472837 70472845 SP1 TRANSFAC yes 55793155
chr17 70472837 70472845 WT1 TRANSFAC yes 55793156
chr17 70472839 70472846 SP1 TRANSFAC yes 55793157
chr17 70472839 70472849 SP1 JASPAR yes 55793158
chr17 70472840 70472848 SP1 TRANSFAC yes 55793159
chr17 70472840 70472850 SP1 JASPAR yes 55793160
Genes associated with rs11658394[chr17:70472840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 71228372 71245091 + C17orf80 ENSG00000141219.11 71228372 755532 Liver 0.409233 16204