EnhancerDB
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  3. rs116589000[chr5:173170290]
Enhancers that have rs116589000[chr5:173170290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173158485 173175335 enh8885
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (OCI-LY7) Blood (GM12878) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9)
chr5 173169995 173170330 vista50227
VISTA
Transcript factors that have rs116589000[chr5:173170290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173170286 173170302 SOX8 JASPAR yes 67899669
chr5 173170286 173170302 SOX8 JASPAR yes 70766557
chr5 173170290 173170308 RARA JASPAR yes 67899670
chr5 173170290 173170308 RARA JASPAR yes 70766558
Genes associated with rs116589000[chr5:173170290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More