EnhancerDB
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  3. rs116589749[chr17:57515130]
Enhancers that have rs116589749[chr17:57515130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57510669 57520490 enh4503
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Esophagus Astrocyte Lung Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs116589749[chr17:57515130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 21775084
chr17 57513026 57515484 ZNF143 GTRD no Epithelial (MCF-7) 108276055
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 21775085
chr17 57513035 57515360 ZNF143 GTRD no Epithelial (MCF-7) 108276056
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 21775092
chr17 57513119 57515431 ZNF143 GTRD no Epithelial (MCF-7) 108276057
chr17 57514243 57515220 ZNF143 GTRD no Epithelial (MCF-7) 21775103
chr17 57514243 57515220 ZNF143 GTRD no Epithelial (MCF-7) 108276058
chr17 57514332 57515419 ZNF143 GTRD no Epithelial (MCF-7) 21775105
chr17 57514332 57515419 ZNF143 GTRD no Epithelial (MCF-7) 108276059
chr17 57514400 57515450 ZNF143 GTRD no Epithelial (MCF-7) 21775107
chr17 57514400 57515450 ZNF143 GTRD no Epithelial (MCF-7) 108276060
chr17 57514446 57515143 ZNF143 GTRD no Epithelial (MCF-7) 21775108
chr17 57514452 57515342 ZNF143 GTRD no Epithelial (MCF-7) 21775110
chr17 57514452 57515342 ZNF143 GTRD no Epithelial (MCF-7) 108276061
chr17 57514547 57515175 ZNF143 GTRD no Epithelial (MCF-7) 21775114
chr17 57514547 57515175 ZNF143 GTRD no Epithelial (MCF-7) 108276062
chr17 57514637 57515222 ZNF143 GTRD no Epithelial (MCF-7) 21775115
chr17 57514637 57515222 ZNF143 GTRD no Epithelial (MCF-7) 108276063
chr17 57515040 57515396 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108276064
chr17 57515052 57515422 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21775117
chr17 57515052 57515422 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108276065
chr17 57515125 57515136 DMRT3 JASPAR yes 55060486
chr17 57515127 57515132 GATA2 JASPAR yes 55060487
Genes associated with rs116589749[chr17:57515130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More