EnhancerDB
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  3. rs116598449[chr17:42626964]
Enhancers that have rs116598449[chr17:42626964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs116598449[chr17:42626964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42625711 42627864 ZNF274 GTRD no Bone Marrow (K562) 21762566
chr17 42625711 42627864 ZNF274 GTRD no Bone Marrow (K562) 107688207
chr17 42626113 42626975 ZNF274 GTRD no Bone Marrow (K562) 21762567
chr17 42626115 42626976 ZNF274 GTRD no Bone Marrow (K562) 21762568
chr17 42626142 42626992 ZNF274 GTRD no Bone Marrow (K562) 21762572
chr17 42626150 42627104 ZNF274 GTRD no Bone Marrow (K562) 21762574
chr17 42626173 42627029 ZNF274 GTRD no Bone Marrow (K562) 21762577
chr17 42626959 42626964 GATA1 TRANSFAC yes 54406616
Genes associated with rs116598449[chr17:42626964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More