EnhancerDB
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  3. rs116602531[chr1:230223819]
Enhancers that have rs116602531[chr1:230223819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116602531[chr1:230223819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230223805 230223819 POU1F1 JASPAR yes 36020182
chr1 230223806 230223819 POU3F3 JASPAR yes 36020184
chr1 230223807 230223819 POU2F1 JASPAR yes 36020186
chr1 230223819 230223828 SP1 TRANSFAC yes 36020191
Genes associated with rs116602531[chr1:230223819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More