EnhancerDB
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  3. rs116617189[chr1:36635168]
Enhancers that have rs116617189[chr1:36635168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs116617189[chr1:36635168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36635153 36635168 FOXP1 JASPAR yes 28122886
chr1 36635154 36635169 FOXP1 JASPAR yes 28122887
chr1 36635155 36635170 FOXP1 JASPAR yes 28122888
chr1 36635155 36635176 IRF1 JASPAR yes 28122889
chr1 36635156 36635171 FOXP1 JASPAR yes 28122890
chr1 36635156 36635177 IRF1 JASPAR yes 28122891
chr1 36635157 36635172 FOXP1 JASPAR yes 28122892
chr1 36635159 36635174 FOXP1 JASPAR yes 28122893
chr1 36635160 36635181 IRF1 JASPAR yes 28122894
chr1 36635161 36635176 FOXP1 JASPAR yes 28122895
Genes associated with rs116617189[chr1:36635168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More