EnhancerDB
  1. Home
  2. SNP
  3. rs116618871[chr1:3454893]
Enhancers that have rs116618871[chr1:3454893]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs116618871[chr1:3454893]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3452284 3461704 ZNF274 GTRD no Liver (HepG2) 107801863
chr1 3454884 3454897 NFKB1 JASPAR yes 26293378
chr1 3454885 3454896 NFKB1 JASPAR yes 26293379
chr1 3454885 3454898 NFKB1 JASPAR yes 26293380
chr1 3454886 3454897 NFKB1 JASPAR yes 26293381
chr1 3454888 3454893 SP1 TRANSFAC yes 26293382
Genes associated with rs116618871[chr1:3454893], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More