EnhancerDB
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  3. rs116636857[chr12:125126871]
Enhancers that have rs116636857[chr12:125126871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116636857[chr12:125126871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125126861 125126873 NHLH1 JASPAR yes 124403046
chr12 125126862 125126872 NHLH1 JASPAR yes 124403047
chr12 125126863 125126884 REST JASPAR yes 124403048
chr12 125126864 125126883 REST JASPAR yes 124403049
chr12 125126866 125126875 HIC2 JASPAR yes 124403050
chr12 125126867 125126887 TP53 JASPAR yes 124403051
chr12 125126868 125126878 SP1 JASPAR yes 124403052
chr12 125126869 125126873 LFA1 TRANSFAC yes 124403053
chr12 125126869 125126889 TP63 JASPAR yes 124403054
chr12 125126870 125126888 TP53 JASPAR yes 124403055
chr12 125126870 125126888 TP73 JASPAR yes 124403056
Genes associated with rs116636857[chr12:125126871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More