EnhancerDB
  1. Home
  2. SNP
  3. rs116645960[chr1:52365550]
Enhancers that have rs116645960[chr1:52365550]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs116645960[chr1:52365550]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52365538 52365553 MEF2C JASPAR yes 28874526
chr1 52365539 52365554 MEF2A JASPAR yes 28874527
Genes associated with rs116645960[chr1:52365550], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More