EnhancerDB
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  3. rs116651727[chr1:41967974]
Enhancers that have rs116651727[chr1:41967974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs116651727[chr1:41967974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41967955 41967976 IRF1 JASPAR yes 28396352
chr1 41967959 41967974 IRF9 JASPAR yes 28396354
chr1 41967965 41967975 NFATC3 JASPAR yes 28396355
Genes associated with rs116651727[chr1:41967974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More