EnhancerDB
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  3. rs116653421[chr18:51773328]
Enhancers that have rs116653421[chr18:51773328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs116653421[chr18:51773328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51772896 51773669 ZNF274 GTRD no Blood (GM12878) 21822858
chr18 51772896 51773669 ZNF274 GTRD no Blood (GM12878) 108337137
chr18 51773141 51773527 ZNF274 GTRD no Blood (GM12878) 21822859
chr18 51773141 51773527 ZNF274 GTRD no Blood (GM12878) 108337138
chr18 51773245 51773702 ZNF274 GTRD no Liver (HepG2) 21822860
chr18 51773245 51773702 ZNF274 GTRD no Liver (HepG2) 108337139
chr18 51773261 51773945 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822861
chr18 51773261 51773945 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337140
chr18 51773278 51773568 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21822862
chr18 51773278 51773568 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108337141
chr18 51773315 51773597 ZNF274 GTRD no Cervix (HeLa-S3) 21822863
chr18 51773315 51773597 ZNF274 GTRD no Cervix (HeLa-S3) 108337142
chr18 51773318 51773642 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337143
chr18 51773321 51773631 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108337144
chr18 51773324 51773329 GATA2 JASPAR yes 110710752
Genes associated with rs116653421[chr18:51773328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More