EnhancerDB
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  3. rs116659815[chr6:13352059]
Enhancers that have rs116659815[chr6:13352059]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13348613 13358032 enh8959
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs116659815[chr6:13352059]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13352042 13352063 IRF1 JASPAR yes 100019410
chr6 13352043 13352064 IRF1 JASPAR yes 100019413
chr6 13352044 13352059 STAT2 JASPAR yes 100019414
chr6 13352047 13352059 IRF1 JASPAR yes 100019415
chr6 13352049 13352064 FOXP1 JASPAR yes 100019417
chr6 13352050 13352061 FOXP2 JASPAR yes 100019418
chr6 13352050 13352062 FOXC2 JASPAR yes 100019419
chr6 13352051 13352062 FOXC1 JASPAR yes 100019420
chr6 13352058 13352068 GSX2 JASPAR yes 100019421
chr6 13352059 13352067 BARX1 JASPAR yes 100019422
Genes associated with rs116659815[chr6:13352059], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More