EnhancerDB
  1. Home
  2. SNP
  3. rs116682671[chr17:38479478]
Enhancers that have rs116682671[chr17:38479478]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38477236 38480096 vista24701
VISTA
Transcript factors that have rs116682671[chr17:38479478]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38478442 38479783 POLR2A UCSC Txn Factor no Conserved 108254486
chr17 38478684 38479620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753657
chr17 38478684 38479620 RUNX3 UCSC Txn Factor no Conserved 108254501
chr17 38478684 38479620 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254502
chr17 38478830 38479514 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753681
chr17 38478830 38479514 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254532
chr17 38478971 38479631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753702
chr17 38478971 38479631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254556
chr17 38479054 38479558 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108254564
chr17 38479079 38479615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753713
chr17 38479079 38479615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254575
chr17 38479187 38479707 ZNF263 UCSC Txn Factor no Conserved 108254588
chr17 38479435 38479711 ZNF274 GTRD no Bone Marrow (K562) 21753721
chr17 38479435 38479711 ZNF274 GTRD no Bone Marrow (K562) 108254589
chr17 38479453 38479889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753722
chr17 38479453 38479889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254590
chr17 38479458 38479732 ZBTB33 GTRD no Lung (A549) 108254591
chr17 38479470 38479870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21753723
chr17 38479470 38479870 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108254592
chr17 38479475 38479488 ZBTB18 JASPAR yes 21233904
chr17 38479475 38479488 ZBTB18 JASPAR yes 54205385
Genes associated with rs116682671[chr17:38479478], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More