EnhancerDB
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  3. rs116709328[chr1:22438679]
Enhancers that have rs116709328[chr1:22438679]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22428625 22443775 enh26577
Brain (SK-N-SH) Large Intestine Ovary Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Spleen Uterus Blood (T-cell) Stomach
Transcript factors that have rs116709328[chr1:22438679]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22438668 22438679 TBX20 JASPAR yes 27347123
chr1 22438669 22438684 JUND JASPAR yes 27347129
chr1 22438670 22438683 JUN JASPAR yes 27347130
chr1 22438674 22438682 CREB1 JASPAR yes 27347131
chr1 22438676 22438691 ESR2 JASPAR yes 27347132
chr1 22438677 22438681 ESR1 TRANSFAC yes 27347133
Genes associated with rs116709328[chr1:22438679], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More