EnhancerDB
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  3. rs116715520[chr1:203281441]
Enhancers that have rs116715520[chr1:203281441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116715520[chr1:203281441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203278869 203283583 ZNF143 GTRD no Epithelial (MCF-7) 21368068
chr1 203279864 203283218 ZNF143 GTRD no Epithelial (MCF-7) 21368074
chr1 203279903 203283339 ZNF143 GTRD no Epithelial (MCF-7) 21368075
chr1 203280080 203281631 ZNF143 GTRD no Epithelial (MCF-7) 21368076
chr1 203280311 203283500 ZNF143 GTRD no Epithelial (MCF-7) 21368079
chr1 203280371 203284002 ZNF143 GTRD no Epithelial (MCF-7) 21368080
chr1 203280467 203281701 ZNF143 GTRD no Epithelial (MCF-7) 21368081
chr1 203280512 203282971 ZNF143 GTRD no Epithelial (MCF-7) 21368082
chr1 203280563 203283039 ZNF143 GTRD no Epithelial (MCF-7) 21368084
chr1 203280573 203281833 ZNF143 GTRD no Epithelial (MCF-7) 21368085
chr1 203280617 203281643 ZNF143 GTRD no Epithelial (MCF-7) 21368086
chr1 203280638 203281595 ZNF274 GTRD no Cervix (HeLa-S3) 21368088
chr1 203280646 203281697 ZNF143 GTRD no Epithelial (MCF-7) 21368089
chr1 203280650 203281534 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21368090
chr1 203280670 203282971 ZNF143 GTRD no Epithelial (MCF-7) 21368091
chr1 203280684 203281615 ZNF274 GTRD no Cervix (HeLa-S3) 21368093
chr1 203280694 203281702 ZNF143 GTRD no Epithelial (MCF-7) 21368094
chr1 203280721 203281648 ZNF143 GTRD no Epithelial (MCF-7) 21368095
chr1 203280722 203281702 ZNF143 GTRD no Epithelial (MCF-7) 21368096
chr1 203280723 203281530 ZNF143 GTRD no Epithelial (MCF-7) 21368097
chr1 203280737 203281637 ZNF143 GTRD no Epithelial (MCF-7) 21368098
chr1 203280747 203281841 ZNF274 GTRD no Cervix (HeLa-S3) 21368100
chr1 203280802 203281710 ZNF274 GTRD no Cervix (HeLa-S3) 21368102
chr1 203280826 203281550 ZNF143 GTRD no Epithelial (MCF-7) 21368103
chr1 203280829 203281655 ZNF143 GTRD no Epithelial (MCF-7) 21368104
chr1 203280839 203281648 ZNF143 GTRD no Epithelial (MCF-7) 21368108
chr1 203280846 203283685 ZNF274 GTRD no Bone Marrow (K562) 21368109
chr1 203280851 203281594 ZNF143 GTRD no Epithelial (MCF-7) 21368110
chr1 203280852 203281713 ZNF143 GTRD no Epithelial (MCF-7) 21368111
chr1 203280856 203281532 ZNF143 GTRD no Epithelial (MCF-7) 21368112
chr1 203280864 203281608 ZNF274 GTRD no Cervix (HeLa-S3) 21368114
chr1 203280879 203281555 ZNF143 GTRD no Epithelial (MCF-7) 21368117
chr1 203280896 203281623 ZNF143 GTRD no Epithelial (MCF-7) 21368120
chr1 203280906 203281817 ZNF143 GTRD no Epithelial (MCF-7) 21368123
chr1 203280911 203281796 ZNF143 GTRD no Epithelial (MCF-7) 21368124
chr1 203280916 203281610 ZNF143 GTRD no Epithelial (MCF-7) 21368126
chr1 203280923 203281631 ZNF143 GTRD no Epithelial (MCF-7) 21368129
chr1 203280929 203281573 ZNF143 GTRD no Epithelial (MCF-7) 21368132
chr1 203280933 203281504 ZNF274 GTRD no Bone Marrow (K562) 21368135
chr1 203280961 203281649 ZNF143 GTRD no Epithelial (MCF-7) 21368141
chr1 203281007 203281524 ZNF143 GTRD no Epithelial (MCF-7) 21368160
chr1 203281031 203281808 ZNF143 GTRD no Epithelial (MCF-7) 21368167
chr1 203281054 203281573 ZNF274 GTRD no Bone Marrow (K562) 21368175
chr1 203281067 203281615 ZNF274 GTRD no Bone Marrow (K562) 21368177
chr1 203281068 203281564 ZNF274 GTRD no Bone Marrow (K562) 21368178
chr1 203281072 203281597 ZNF143 GTRD no Epithelial (MCF-7) 21368179
chr1 203281076 203281460 ZNF274 GTRD no Bone Marrow (K562) 21368180
chr1 203281076 203281543 ZNF143 GTRD no Epithelial (MCF-7) 21368181
chr1 203281076 203281602 ZNF143 GTRD no Epithelial (MCF-7) 21368182
chr1 203281097 203281513 ZNF274 GTRD no Bone Marrow (K562) 21368183
chr1 203281098 203281546 ZNF274 GTRD no Cervix (HeLa-S3) 21368184
chr1 203281112 203281517 ZNF274 GTRD no Cervix (HeLa-S3) 21368185
chr1 203281137 203281540 ZNF274 GTRD no Bone Marrow (K562) 21368187
chr1 203281406 203283900 ZNF274 GTRD no Bone Marrow (K562) 21368191
chr1 203281440 203281444 NFE TRANSFAC yes 34615831
Genes associated with rs116715520[chr1:203281441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More