EnhancerDB
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  3. rs11672600[chr19:2487561]
Enhancers that have rs11672600[chr19:2487561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11672600[chr19:2487561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2487107 2490254 TCF7L2 GTRD no Colon (HCT116) 108360382
chr19 2487554 2487575 IRF1 JASPAR yes 112065403
chr19 2487558 2487573 FOXP1 JASPAR yes 112065404
chr19 2487559 2487574 FOXP1 JASPAR yes 112065405
chr19 2487560 2487575 FOXP1 JASPAR yes 112065406
chr19 2487561 2487576 FOXP1 JASPAR yes 112065407
Genes associated with rs11672600[chr19:2487561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More