EnhancerDB
  1. Home
  2. SNP
  3. rs116742039[chr1:52367984]
Enhancers that have rs116742039[chr1:52367984]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52359912 52371075 enh11849
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs116742039[chr1:52367984]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52367964 52367984 RREB1 JASPAR yes 28874928
chr1 52367966 52367986 RREB1 JASPAR yes 28874929
chr1 52367979 52367987 TBX5 JASPAR yes 28874930
Genes associated with rs116742039[chr1:52367984], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More