EnhancerDB
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  3. rs116786319[chr1:25356371]
Enhancers that have rs116786319[chr1:25356371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
Transcript factors that have rs116786319[chr1:25356371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802491
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802492
chr1 25355056 25358083 ZNF274 GTRD no Bone Marrow (K562) 107802493
chr1 25356363 25356375 TFAP2A JASPAR yes 27555704
chr1 25356363 25356376 TFAP2A JASPAR yes 27555705
chr1 25356363 25356376 TFAP2B JASPAR yes 27555706
chr1 25356363 25356376 TFAP2C JASPAR yes 27555707
chr1 25356363 25356377 EBF1 JASPAR yes 27555708
chr1 25356364 25356373 TFAP2A JASPAR yes 27555709
chr1 25356364 25356377 TFAP2A JASPAR yes 27555710
chr1 25356364 25356377 TFAP2B JASPAR yes 27555711
chr1 25356364 25356377 TFAP2C JASPAR yes 27555712
chr1 25356365 25356377 TFAP2A JASPAR yes 27555713
chr1 25356367 25356376 TFAP2A JASPAR yes 27555714
Genes associated with rs116786319[chr1:25356371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More