EnhancerDB
  1. Home
  2. SNP
  3. rs116803873[chr1:55392719]
Enhancers that have rs116803873[chr1:55392719]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55383385 55396315 enh11876
Skin (Keratinocyte) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Esophagus Stomach Muscle (A673) Placenta Lung (PC-9) Breast Muscle (Myotube) Heart
Transcript factors that have rs116803873[chr1:55392719]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55392716 55392726 NKX2-3 JASPAR yes 29006397
chr1 55392717 55392725 ISL2 JASPAR yes 29006398
chr1 55392717 55392726 NKX3-2 JASPAR yes 29006399
Genes associated with rs116803873[chr1:55392719], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More