EnhancerDB
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  3. rs116825420[chr17:55688402]
Enhancers that have rs116825420[chr17:55688402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116825420[chr17:55688402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55688390 55688404 NR2F1 JASPAR yes 54975192
chr17 55688397 55688409 PROX1 JASPAR yes 54975193
Genes associated with rs116825420[chr17:55688402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More