EnhancerDB
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  3. rs116825850[chr1:22366426]
Enhancers that have rs116825850[chr1:22366426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22362561 22373835 enh11596
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 22366226 22366841 vista705
VISTA
Transcript factors that have rs116825850[chr1:22366426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22366417 22366432 RFX5 JASPAR yes 27341096
chr1 22366417 22366432 RFX5 JASPAR yes 118247630
chr1 22366422 22366435 SCRT2 JASPAR yes 27341097
chr1 22366422 22366435 SCRT2 JASPAR yes 118247631
Genes associated with rs116825850[chr1:22366426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More